PISCES

Project details

Released 11/18/2020

PISCES eases processing of large mRNA-seq experiments by encouraging capture of metadata using sim- ple textual file formats, processing samples on either a single machine or in parallel on a high performance computing cluster (HPC), validating sample identity using genetic fingerprinting, and summarizing all outputs in analysis-ready data matrices.

GitHub repo

a package for rapid quantitation and quality control of large scale mRNA-seq datasets

PISCES workflow

See the current documentation at https://opensource.nibr.com/pisces/.

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